STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81035.1KEGG: bde:BDP_1495 3.4e-64 ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.99. (216 aa)    
Predicted Functional Partners:
KXB81034.1
KEGG: crd:CRES_0317 4.7e-42 ABC transporter ATP-binding protein/permease K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.953
KXB79853.1
Mutacin ABC transporter, ATP-binding protein MutF; KEGG: bya:BANAU_3847 5.0e-63 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 
0.909
KXB81004.1
Efflux ABC transporter, permease protein; KEGG: ase:ACPL_5256 2.0e-82 Macrolide export ATP-binding/permease protein macB K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.907
KXB79255.1
ABC transporter, ATP-binding protein; KEGG: ppo:PPM_2357 7.0e-150 msbA2; lipid A export ATP-binding/permease protein MsbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.879
KXB79352.1
ABC transporter, ATP-binding protein; KEGG: del:DelCs14_0983 1.0e-62 xenobiotic-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.832
KXB79377.1
Putative dipeptide ABC transporter, permease protein DppC; KEGG: pfe:PSF113_0899 1.5e-45 dppC2; protein DppC K12370; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
    0.808
KXB80337.1
Efflux ABC transporter, permease protein; KEGG: cli:Clim_1944 4.8e-14 ABC transporter; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.770
KXB79253.1
KEGG: pva:Pvag_1909 1.4e-60 ABC transporter permease K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
  0.759
KXB80336.1
Efflux ABC transporter, permease protein; KEGG: rsc:RCFBP_mp30217 2.9e-12 macrolide export ATP-binding/permease macB (macB) K02004; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.707
KXB80331.1
Efflux ABC transporter, permease protein; KEGG: yph:YPC_2817 2.2e-06 Macrolide-specific ABC-type efflux carrier; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 9.55.
   
  0.648
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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