STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81060.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (109 aa)    
Predicted Functional Partners:
KXB80552.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.599
KXB80442.1
KEGG: bbp:BBPR_0426 9.3e-181 fibronectin type III.
  
    0.568
KXB80532.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.568
KXB81137.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87.
  
     0.557
KXB81062.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.499
KXB80445.1
Transglutaminase-like protein; KEGG: bya:BANAU_0585 6.8e-10 yebA; membrane-bound protease; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.497
KXB79346.1
Nuclease, RecB family; KEGG: mir:OCQ_12950 2.8e-35 ATPase K06860; Psort location: Cytoplasmic, score: 7.50.
  
     0.495
KXB81061.1
Phosphate transporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.485
KXB81800.1
Hypothetical protein.
  
     0.475
KXB80444.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
 
     0.458
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.