STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB81158.1KEGG: ssm:Spirs_0789 3.5e-110 aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+); Psort location: Cytoplasmic, score: 9.97. (469 aa)    
Predicted Functional Partners:
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
 0.890
KXB82078.1
KEGG: cfi:Celf_2655 0. 2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
  
 0.851
KXB82090.1
KEGG: ahe:Arch_1433 8.8e-153 citrate synthase I K01647; Psort location: Cytoplasmic, score: 9.97.
  
 0.843
KXB81026.1
Aldehyde dehydrogenase family protein; KEGG: mcu:HMPREF0573_11678 0. L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase K13821; Psort location: Cytoplasmic, score: 9.97; Belongs to the aldehyde dehydrogenase family.
 
0.843
KXB79264.1
FAD binding domain protein; KEGG: jde:Jden_2117 5.8e-275 D-lactate dehydrogenase K06911; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.835
KXB82071.1
KEGG: rer:RER_14720 4.9e-102 pta; phosphate acetyltransferase K13788; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.832
KXB79835.1
Putative chlorophyll synthesis pathway protein BchC; KEGG: paw:PAZ_c06590 2.7e-87 tdh2; L-threonine 3-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
 
 0.827
KXB81012.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: mcu:HMPREF0573_10721 5.0e-221 gltD; glutamate synthase (NADPH) small subunit; Psort location: Cytoplasmic, score: 9.97.
    
 0.821
KXB79522.1
KEGG: ahe:Arch_1331 1.6e-295 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239; Psort location: Cytoplasmic, score: 9.89.
   
 0.816
KXB79697.1
Transaldolase; KEGG: pfr:PFREUD_19040 1.6e-130 tal2; transaldolase K00616; Psort location: Cytoplasmic, score: 7.50.
  
 0.815
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.