STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80712.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (64 aa)    
Predicted Functional Partners:
KXB80710.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.810
KXB80711.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.800
KXB80708.1
CsbD-like protein; KEGG: mel:Metbo_0700 9.7e-05 cob/CoM heterodisulfide reductase subunit C K03390; Belongs to the UPF0337 (CsbD) family.
       0.799
KXB80714.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.780
KXB80709.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.764
KXB80713.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.526
KXB80715.1
Hypothetical protein; KEGG: mcc:699913 0.0067 TTBK1; tau tubulin kinase 1; K08815 tau tubulin kinase.
       0.447
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.