STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80468.1Alkyl hydroperoxide reductase subunit C; KEGG: ahe:Arch_1323 1.1e-67 peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); Psort location: Cytoplasmic, score: 9.97. (187 aa)    
Predicted Functional Partners:
KXB80469.1
KEGG: ahe:Arch_1322 1.0e-142 alkyl hydroperoxide reductase subunit F; K03387 alkyl hydroperoxide reductase subunit F; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.999
KXB80967.1
KEGG: iva:Isova_3010 5.5e-112 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.941
KXB80519.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.864
KXB81532.1
HRDC domain protein; KEGG: bcv:Bcav_2897 5.8e-165 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
    
   0.827
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.789
KXB80966.1
Thioredoxin; KEGG: ava:Ava_2654 6.0e-28 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
  
 
 0.733
KXB81799.1
KEGG: bde:BDP_1936 4.2e-27 thioredoxin domain-containing protein K05838; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.703
KXB80779.1
Transcriptional regulator, Fur family; KEGG: apb:SAR116_1155 1.8e-10 ferric uptake regulation protein K03711; Psort location: Cytoplasmic, score: 9.97; Belongs to the Fur family.
  
  
 0.651
KXB80548.1
mercury(II) reductase; KEGG: sag:SAG1254 2.1e-279 merA-1; mercuric reductase; K00520 mercuric reductase; Psort location: Cytoplasmic, score: 9.97.
  
 0.629
KXB79995.1
Dihydrolipoyl dehydrogenase; KEGG: jde:Jden_1475 9.7e-163 dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
 0.619
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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