STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80471.1Mg chelatase-like protein; KEGG: bde:BDP_0806 9.8e-99 ATPase-like magnesium chelatase subunit ChlI K07391; Psort location: Cytoplasmic, score: 7.50. (480 aa)    
Predicted Functional Partners:
KXB80473.1
DNA protecting protein DprA; KEGG: pfe:PSF113_0071 8.3e-38 smf; protein Smf K04096; Psort location: Cytoplasmic, score: 7.50.
 
 0.945
KXB80470.1
TIGR00252 family protein; KEGG: sen:SACE_6045 9.2e-16 endonuclease K07460; Psort location: Cytoplasmic, score: 7.50; Belongs to the UPF0102 family.
 
    0.893
KXB79427.1
Putative DNA protecting protein DprA; KEGG: pfe:PSF113_0071 3.8e-26 smf; protein Smf K04096; Psort location: Cytoplasmic, score: 7.50.
 
 0.776
KXB80777.1
ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 0.00036 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.716
xerC
Phage integrase, SAM-like domain protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.615
KXB80465.1
KEGG: jde:Jden_0990 1.5e-56 signal peptidase I; K03100 signal peptidase I; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the peptidase S26 family.
 
     0.581
KXB80466.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.505
KXB80467.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.505
KXB80468.1
Alkyl hydroperoxide reductase subunit C; KEGG: ahe:Arch_1323 1.1e-67 peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); Psort location: Cytoplasmic, score: 9.97.
       0.468
KXB80469.1
KEGG: ahe:Arch_1322 1.0e-142 alkyl hydroperoxide reductase subunit F; K03387 alkyl hydroperoxide reductase subunit F; Psort location: CytoplasmicMembrane, score: 8.78.
       0.468
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.