STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80309.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: afm:AFUA_2G00230 1.3e-22 Amid-like NADH oxidoreductase K00540; Psort location: Cytoplasmic, score: 7.50. (364 aa)    
Predicted Functional Partners:
hybD
KEGG: mcu:HMPREF0573_10779 2.8e-69 hybD; hydrogenase 2 maturation protease K08567; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.818
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.798
KXB80310.1
Hypothetical protein; KEGG: cfa:475354 5.1e-08 NRD1; nardilysin (N-arginine dibasic convertase); K01411 nardilysin; Psort location: Cytoplasmic, score: 7.50.
       0.667
KXB80678.1
NADH-ubiquinone/plastoquinone family protein; KEGG: bcv:Bcav_3818 5.8e-204 monovalent cation/H+ antiporter subunit A K05565; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.593
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.576
KXB79283.1
NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.
   
 
 0.570
KXB79264.1
FAD binding domain protein; KEGG: jde:Jden_2117 5.8e-275 D-lactate dehydrogenase K06911; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.558
nuoN
Proton-translocating NADH-quinone oxidoreductase, chain; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
     
 0.555
KXB79278.1
Putative NADH oxidoreductase, F subunit; KEGG: mcu:HMPREF0573_10997 2.3e-170 nuoF; NADH dehydrogenase K00335; Psort location: Cytoplasmic, score: 9.97.
     
 0.555
KXB80305.1
KEGG: mcu:HMPREF0573_11023 3.4e-295 dmsA; anaerobic dimethyl sulfoxide reductase subunit A K07306; Psort location: Cytoplasmic, score: 9.67; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.554
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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