STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80159.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
KXB80158.1
Hypothetical protein.
       0.773
KXB80160.1
Hypothetical protein.
       0.773
KXB80161.1
Hypothetical protein.
       0.773
KXB80162.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.678
KXB80163.1
KEGG: ssk:SSUD12_1198 1.2e-54 DNA methylase; K13581 modification methylase.
       0.564
KXB80268.1
Hypothetical protein.
       0.495
KXB80269.1
KEGG: rer:RER_49390 2.3e-12 signal peptidase I K13280.
       0.495
KXB80164.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.419
KXB80165.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.419
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.