STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80049.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (95 aa)    
Predicted Functional Partners:
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.535
KXB81848.1
Hypothetical protein.
  
     0.487
KXB80044.1
Segregation and condensation protein B; KEGG: apb:SAR116_0418 7.6e-12 transcriptional regulator containing the HTH domain K06024; Psort location: Cytoplasmic, score: 9.97.
 
     0.478
KXB80047.1
Hypothetical protein.
       0.473
KXB80986.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.461
KXB79324.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.461
KXB79325.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.449
KXB80045.1
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
     0.420
KXB81142.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.