STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB80065.1Aminotransferase, class I/II; KEGG: gob:Gobs_1786 7.5e-69 class I and II aminotransferase protein; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 7.50. (394 aa)    
Predicted Functional Partners:
KXB81559.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; KEGG: jde:Jden_2111 2.6e-137 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740; Psort location: Cytoplasmic, score: 9.97.
   
 0.943
KXB80353.1
Cysteine synthase A; KEGG: cdw:CDPW8_1862 1.7e-101 cysK; cysteine synthase; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 7.50; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.939
KXB81100.1
KEGG: bcv:Bcav_1281 2.9e-115 Homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
    
 0.934
KXB81050.1
Putative aspartate transaminase; KEGG: mcu:HMPREF0573_11145 1.4e-145 aspC; aspartate transaminase; Psort location: Cytoplasmic, score: 7.50.
  
  
0.923
KXB81538.1
KEGG: amd:AMED_1634 1.7e-117 ilvA; threonine dehydratase; K01754 threonine dehydratase; Psort location: Cytoplasmic, score: 7.50.
    
  0.917
KXB81132.1
Methionine synthase, vitamin-B12 independent; KEGG: cur:cur_1584 2.6e-153 hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
  0.914
KXB80348.1
Phosphotransferase enzyme family protein; KEGG: cfu:CFU_1573 2.8e-37 putative homoserine kinase type II, PnuC-associated, THI-regulated branch.
   
 
  0.747
KXB80352.1
Serine O-acetyltransferase; KEGG: mcu:HMPREF0573_11497 1.9e-56 cysE; putative serine O-acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.67.
     
 0.581
metXA
Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
     
 0.564
KXB82091.1
KEGG: tfu:Tfu_0492 1.3e-87 N-succinyldiaminopimelate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
     
 0.513
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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