STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argHArgininosuccinate lyase; KEGG: ske:Sked_22260 2.5e-171 argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 7.50. (475 aa)    
Predicted Functional Partners:
argG
KEGG: cfl:Cfla_1647 1.5e-171 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 7.50; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 0.999
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.997
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
 
 0.996
argJ
Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
 
 
 0.988
KXB80583.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.985
KXB79726.1
Putative succinylornithine transaminase; KEGG: mcu:HMPREF0573_10024 4.4e-96 argD; acetylornithine transaminase K00818; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.985
argR
Arginine repressor; Regulates arginine biosynthesis genes.
  
  
 0.971
KXB81116.1
Malate dehydrogenase; KEGG: mcu:HMPREF0573_10269 2.0e-130 mdh; malate dehydrogenase K00024; Belongs to the LDH/MDH superfamily.
   
  0.926
KXB80931.1
KEGG: bcv:Bcav_3976 9.7e-163 adenylosuccinate lyase K01756; Psort location: Cytoplasmic, score: 7.50.
    
 0.924
KXB80582.1
KEGG: kse:Ksed_06020 2.2e-92 arginine deiminase; K01478 arginine deiminase; Psort location: Cytoplasmic, score: 7.50.
     
 0.924
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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