STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79676.1LICD family protein; KEGG: ccl:Clocl_1018 1.7e-30 LPS biosynthesis protein; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50. (272 aa)    
Predicted Functional Partners:
KXB80085.1
KEGG: sor:SOR_1377 2.2e-133 licA; choline kinase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.877
KXB79675.1
LICD family protein; KEGG: eel:EUBELI_00101 4.1e-36 lipopolysaccharide cholinephosphotransferase; K07271 lipopolysaccharide cholinephosphotransferase; Psort location: Cytoplasmic, score: 7.50.
 
    
0.801
KXB79678.1
Putative ATP synthase F0, A subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.694
KXB79679.1
Glycosyltransferase, group 1 family protein; KEGG: hhd:HBHAL_1966 2.0e-52 group 1 glycosyltransferase; Psort location: Cytoplasmic, score: 7.50.
      0.504
KXB79685.1
Aminotransferase, class I/II; KEGG: bhl:Bache_2596 9.3e-181 Histidinol-phosphate transaminase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.489
KXB79677.1
Hypothetical protein; KEGG: llk:LLKF_0207 1.4e-14 ycbF; group 1 glycosyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.481
KXB79673.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.452
KXB79674.1
Glycosyltransferase, group 2 family protein; KEGG: krh:KRH_09020 1.4e-60 putative glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.55.
       0.436
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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