STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB79240.1FHA domain protein; KEGG: bde:BDP_0043 2.5e-20 FHA domain containing protein; Psort location: CytoplasmicMembrane, score: 9.55. (163 aa)    
Predicted Functional Partners:
KXB82078.1
KEGG: cfi:Celf_2655 0. 2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
    
 
 0.999
KXB80526.1
PASTA domain protein; KEGG: mcu:HMPREF0573_11797 3.7e-131 spk1; non-specific serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 
 0.999
KXB79245.1
Putative serine/threonine-protein kinase PrkC; KEGG: mcu:HMPREF0573_10646 9.0e-144 pknB; putative non-specific serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
 0.999
KXB79239.1
FHA domain protein; KEGG: cya:CYA_2405 3.2e-07 adenylate cyclase; K01768 adenylate cyclase.
 
   
 0.989
KXB79241.1
Protein phosphatase 2C; KEGG: mcu:HMPREF0573_10642 1.1e-81 phosphoprotein phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.980
KXB79422.1
Hypothetical protein; KEGG: ase:ACPL_6596 4.2e-13 putative E3 ubiquitin-protein ligase HERC4.
 
 
  0.963
KXB79244.1
Kinase domain protein; KEGG: bcv:Bcav_0027 4.9e-81 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
 
 0.916
KXB79243.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: ske:Sked_00200 9.6e-92 cell elongation-specific peptidoglycan D,D-transpeptidase; K05364 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.51.
 
   
 0.899
KXB79242.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: apv:Apar_1344 5.4e-82 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
   
 0.795
KXB80802.1
Kinase domain protein; KEGG: iva:Isova_2617 6.8e-59 serine/threonine protein kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
 0.785
Your Current Organism:
Varibaculum cambriense
NCBI taxonomy Id: 184870
Other names: CCUG 44998, CIP 107344, DSM 15806, V. cambriense, Varibaculum cambriense corrig. Hall et al. 2003, Varibaculum cambriensis, strain R12359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.