STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN43332.1Prenyltransferase, UbiA family. (301 aa)    
Predicted Functional Partners:
atpD
Membrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.756
CEN48173.1
Peptidyl-prolyl cis-trans isomerase.
  
     0.714
CEN44357.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.680
CEN45377.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.674
CEN46017.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase (fragment).
  
  
 0.631
CEN47311.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.612
CEN44828.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.606
CEN43961.1
Outer membrane protein beta-barrel domain protein.
 
     0.593
CEN43290.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.588
CEN48138.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.584
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.