STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN44677.1Putative tyrosine-protein kinase involved in exopolysaccharide biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (783 aa)    
Predicted Functional Partners:
CEN44679.1
Periplasmic protein involved in polysaccharide export.
 0.999
CEN49359.1
Polysaccharide export protein.
  
 0.999
pglC
Undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase.
 
 
 0.966
CEN44485.1
Putative UDP-GlcNAc-4,6-dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.920
CEN44680.1
Uncharacterized HIT-like protein.
  
    0.801
CEN45966.1
Putative ferredoxin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.755
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
     
 0.714
CEN45185.1
Serine O-acetyltransferase.
  
 
 0.711
CEN45599.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.696
CEN47386.1
Putative Protein-tyrosine-phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.696
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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