STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN44783.1Outer membrane efflux protein. (431 aa)    
Predicted Functional Partners:
CEN44583.1
Efflux pump periplasmic linker bepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.974
CEN45641.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.948
CEN45650.1
Outer membrane protein.
  
  
 
0.945
CEN47504.1
Efflux transporter, RND family, MFP subunit (fragment).
 
  0.911
CEN46548.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.860
CEN47446.1
Macrolide export ATP-binding/permease protein macB.
 
   0.828
CEN49328.1
MacB-like periplasmic core domain protein.
 
   0.826
CEN45635.1
Nodulation protein nolG; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.725
yknY
Uncharacterized ABC transporter ATP-binding protein YknY; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
   0.699
bepE
Hypothetical protein; No homology to any previously reported sequences; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.660
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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