STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN44786.1Uncharacterized metalloprotease yebA. (432 aa)    
Predicted Functional Partners:
CEN44784.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
pgi
Glucosephosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GPI family.
       0.773
CEN47722.1
Putative peptidase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.699
CEN44790.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.603
CEN43770.1
Peptidase, M23 family (fragment).
  
     0.600
CEN44783.1
Outer membrane efflux protein.
 
     0.600
CEN49019.1
Putative lysostaphin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.540
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
    0.461
CEN45235.1
DD-transpeptidase.
  
     0.424
CEN44793.1
DNA alkylation repair enzyme.
       0.419
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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