STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN44804.1TonB-denpendent receptor. (1077 aa)    
Predicted Functional Partners:
CEN44802.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.913
CEN46270.1
RagB/SusD family protein.
  
 
   0.893
CEN45246.1
SusD family protein.
 
 
   0.810
CEN44825.1
RagB/SusD domain protein.
 
     0.775
CEN43053.1
Starch-binding protein, SusD-like family.
  
 
   0.753
CEN49433.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
   0.729
CEN48908.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
   0.705
CEN45549.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.581
CEN46819.1
RagB/SusD domain protein.
  
 
   0.552
CEN46888.1
Outer membrane insertion signal domain protein.
  
     0.538
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.