STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN45297.1Iron dependent repressor, DNA binding domain protein. (239 aa)    
Predicted Functional Partners:
CEN45299.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.718
CEN45295.1
Uncharacterized acyl-CoA thioester hydrolase.
       0.689
CEN45292.1
Sporulation domain protein.
  
    0.628
CEN49409.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.500
CEN46830.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
  
 0.400
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.