STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN45459.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (328 aa)    
Predicted Functional Partners:
CEN45462.1
Putative 4-alpha-glucanotransferase and amylo-alpha-1,6-glucosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.727
GLC
1,4-alpha-glucan-branching enzyme.
       0.598
CEN45464.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.540
CEN47607.1
Hypothetical protein; No homology to any previously reported sequences.
  
    0.523
hsdM
DNA methylase M; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.519
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
      0.465
CEN44657.1
Putative plasmid maintenance system antidote protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.450
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.