STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN45480.1Putative alpha-amylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (396 aa)    
Predicted Functional Partners:
GLC
1,4-alpha-glucan-branching enzyme.
 
  
  0.949
CEN48954.1
Glycogen phosphorylase.
 
 
 0.944
CEN45462.1
Putative 4-alpha-glucanotransferase and amylo-alpha-1,6-glucosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
  0.824
CEN45540.1
Bla.
    
  0.822
CEN46192.1
Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
     
 0.818
CEN45473.1
Uncharacterized glycosyltransferase.
 
  
  0.804
CEN45482.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.581
CEN45478.1
Hypothetical protein; No homology to any previously reported sequences.
       0.570
susA
Neopullulanase SusA; Belongs to the glycosyl hydrolase 13 family.
    
 0.426
CEN48541.1
Starch (bacterial glycogen) synthase.
  
 
  0.409
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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