STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN48274.1TonB-dependent receptor. (904 aa)    
Predicted Functional Partners:
CEN48079.1
Rhythmic message 1.
 
     0.800
CEN43516.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.652
CEN45505.1
Gliding motility-associated protein GldN.
  
     0.545
CEN45441.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
   0.535
CEN45878.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.531
CEN43265.1
TonB family domain protein.
   
   0.493
CEN43800.1
Putative Conserved Isoleucine--tRNA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.493
CEN46625.1
TonB-dependent receptor; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
   0.493
CEN48173.1
Peptidyl-prolyl cis-trans isomerase.
  
     0.483
CEN49211.1
Heptosyltransferase.
  
     0.473
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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