STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEN48564.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (96 aa)    
Predicted Functional Partners:
CEN43226.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.622
CEN46054.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.618
CEN47311.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.560
gldA
Gliding motility-associated ABC transporter ATP-binding subunit GldA.
       0.515
CEN48567.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.453
CEN49828.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
   0.453
rpmC
50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
     0.443
CEN48488.1
Glycosyltransferase, group 1 family protein.
  
     0.439
CEN47836.1
Methyltransferase domain protein.
  
     0.410
CEN43313.1
Putative Arsenate reductase (glutaredoxin); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ArsC family.
  
     0.406
Your Current Organism:
Capnocytophaga canis
NCBI taxonomy Id: 1848903
Other names: C. canis, Capnocytophaga canis Renzi et al. 2016, Capnocytophaga sp. HP20001, Capnocytophaga sp. HP33001, Capnocytophaga sp. HP40001, DSM 101831, LMG 29146, LMG:29146, strain CcD38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.