STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP6252_13019Zn(2)-C6 fungal-type domain-containing protein. (425 aa)    
Predicted Functional Partners:
BP6252_08518
Thioredoxin; Belongs to the thioredoxin family.
    
 0.691
BP6252_05049
Thioredoxin domain-containing protein.
    
 0.691
BP6252_12428
E3 ubiquitin-protein ligase.
    
 
 0.562
BP6252_00119
Uncharacterized protein.
    
 
 0.528
BP6252_07534
Uncharacterized protein.
    
 
 0.475
BP6252_03073
Uncharacterized protein.
    
 
 0.475
BP6252_03465
Metallo-dependent phosphatase-4.
    
 
 0.475
BP6252_02589
Uncharacterized protein.
    
 
 0.475
BP6252_00273
WW domain-containing protein.
    
 
 0.475
BP6252_03776
Outer arm dynein light chain 1.
    
  0.464
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.