STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP6252_06114TAF4 domain-containing protein. (638 aa)    
Predicted Functional Partners:
BP6252_12062
Uncharacterized protein.
  
 0.680
BP6252_10054
Amidase signature (AS) enzyme-4.
  
 0.680
BP6252_06115
Uncharacterized protein.
  
 0.680
BP6252_05163
Uncharacterized protein.
  
 0.680
BP6252_06327
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
  
 
 0.600
BP6252_08938
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.553
BP6252_08072
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.553
BP6252_04550
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
 
 0.540
BP6252_06701
Uncharacterized protein.
     
 0.525
BP6252_13486
Rhodanese domain-containing protein.
     
 0.507
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.