STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP6252_03304Putative acyl-CoA dehydrogenase. (510 aa)    
Predicted Functional Partners:
BP6252_05453
Complex I intermediate-associated protein-like protein CIA30.
   
 0.978
BP6252_00687
Uncharacterized protein.
    
 0.952
BP6252_02643
NADH-ubiquinone oxidoreductase-like protein subunit; Belongs to the complex I 49 kDa subunit family.
   
 0.945
BP6252_08007
Carnitine acetyl transferas-like protein.
   
 0.939
BP6252_06366
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.939
BP6252_09409
Uncharacterized protein.
   
 0.908
BP6252_12448
NADH-ubiquinone oxidoreductase subunit 1; Belongs to the complex I 20 kDa subunit family.
   
 0.898
BP6252_09593
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
 0.898
BP6252_04270
Electron transfer flavoprotein subunit alpha.
  
 0.892
BP6252_12057
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.880
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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