STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BP6252_00037Putative ABC1 transport protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1557 aa)    
Predicted Functional Partners:
BP6252_06336
AtrD-1; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.631
BP6252_12043
AtrD-2; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.630
BP6252_08838
Uncharacterized protein.
    
 0.590
BP6252_06443
Cytochrome c oxidase assembly protein COX15.
    
 0.556
BP6252_10281
Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.512
BP6252_13762
Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.511
BP6252_13993
ABC multidrug transporter; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.509
BP6252_12584
ABC transporter-2; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.501
BP6252_02249
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.501
BP6252_09961
Uncharacterized protein; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily.
  
  
 
0.498
Your Current Organism:
Coleophoma cylindrospora
NCBI taxonomy Id: 1849047
Other names: C. cylindrospora, Coleophoma sp. CBS 449.70, Macrophoma cylindrospora, Phoma cylindrospora, Sphaeropsis cylindrospora
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.