STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAO04447.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
OAO04446.1
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
OAO04442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.796
OAO04440.1
8-amino-7-oxononanoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.775
OAO05272.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
OAO04436.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
OAO04225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.746
OAO04443.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.726
OAO02426.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.652
OAO04444.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.619
OAO04540.1
LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.566
Your Current Organism:
Sphingomonadales bacterium EhC05
NCBI taxonomy Id: 1849171
Other names: S. bacterium EhC05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.