STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAO04130.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
OAO04129.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OAO00991.1
Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.
 
 
 0.627
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
       0.604
OAO04128.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
OAO01029.1
RpsU-divergently transcribed; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
OAO04112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
OAO03781.1
Cobaltochelatase subunit CobS; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.533
OAO00438.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.508
OAN97311.1
DNA methylase N-4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.504
OAO01770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.504
Your Current Organism:
Sphingomonadales bacterium EhC05
NCBI taxonomy Id: 1849171
Other names: S. bacterium EhC05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.