STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAO00987.1Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)    
Predicted Functional Partners:
OAO00945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.939
OAO00949.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
OAO00807.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
OAO00746.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.785
OAO00808.1
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
OAO00947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
OAO00953.1
type-F conjugative transfer system protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
OAO00956.1
type-IV secretion system protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
OAO00959.1
Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
OAO00744.1
Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
Your Current Organism:
Sphingomonadales bacterium EhC05
NCBI taxonomy Id: 1849171
Other names: S. bacterium EhC05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.