STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GL50803_16172Actin related protein; Belongs to the actin family. (344 aa)    
Predicted Functional Partners:
GL50803_9825
RuvB-like helicase; Belongs to the RuvB family.
    
 0.943
GL50803_1721
TATA-binding protein-like factor.
   
 0.925
GL50803_15113
Actin; Belongs to the actin family.
    
 0.922
GL50803_3977
G2/mitotic-specific cyclin B; Belongs to the cyclin family.
   
 0.918
GL50803_11039
Actin related protein.
    
 0.897
GL50803_13797
Kinesin-14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.891
GL50803_17565
RuvB-like helicase; Belongs to the RuvB family.
   
 0.891
GL50803_23330
Uncharacterized protein.
   
 0.880
GL50803_16143
Transcription regulatory protein SNF2.
   
 0.876
GL50803_135001
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.821
Your Current Organism:
Giardia lamblia ATCC 50803
NCBI taxonomy Id: 184922
Other names: G. lamblia ATCC 50803, Giardia intestinalis ATCC 50803
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.