STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQL56418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)    
Predicted Functional Partners:
AQL56419.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.726
AQL57082.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
AQL56420.1
Peptidase U35; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.461
AQL56421.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
AQL56416.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
AQL56422.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.453
AQL56423.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
AQL56424.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.447
Your Current Organism:
Auricoccus indicus
NCBI taxonomy Id: 1849491
Other names: A. indicus, Auricoccus indicus Prakash et al. 2017, CCUG 69858, KCTC 33611, MCC 3027, Staphylococcaceae bacterium S31, strain S31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.