STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001660705_03512Unannotated protein. (181 aa)    
Predicted Functional Partners:
GCA_001660705_03511
Unannotated protein.
 
   0.908
GCA_001660705_03510
Unannotated protein.
       0.721
GCA_001660705_04523
Unannotated protein.
  
     0.702
GCA_001660705_04554
Unannotated protein.
    
 0.690
GCA_001660705_01597
Unannotated protein.
  
     0.685
GCA_001660705_04276
Unannotated protein.
  
     0.677
GCA_001660705_04553
Unannotated protein.
    
 0.676
GCA_001660705_01706
Unannotated protein.
 
   0.675
GCA_001660705_00561
Unannotated protein.
  
     0.643
GCA_001660705_01545
Unannotated protein.
  
   0.639
Your Current Organism:
Labilibacter aurantiacus
NCBI taxonomy Id: 1849719
Other names: Cytophaga sp. HQYD1, KCTC 42583, L. aurantiacus, Labilibacter aurantiacus Lu et al. 2017, Labilibacter sp. HQYD1, MCCC 1K02304, strain HQYD1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.