STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ76878.1Acetyltransferase (GNAT) domain-containing protein. (170 aa)    
Predicted Functional Partners:
SCZ76880.1
Hypothetical protein.
       0.773
SCZ76882.1
DNA repair photolyase.
       0.750
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
     
 0.618
SCZ76876.1
Hypothetical protein.
       0.586
SCZ79192.1
Acetyltransferase (GNAT) domain-containing protein.
 
    0.481
SCZ81060.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.477
SCZ77977.1
Phosphotransferase enzyme family protein.
  
 
   0.444
SCZ76875.1
Hypothetical protein.
       0.441
SCZ76889.1
His Kinase A (phospho-acceptor) domain-containing protein.
       0.430
SCZ76891.1
Multiple sugar transport system substrate-binding protein.
       0.430
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.