Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ76436.1 | SCZ77463.1 | SAMN02910350_00253 | SAMN02910350_00782 | DNA repair exonuclease SbcCD nuclease subunit. | DNA topoisomerase-3. | 0.752 |
SCZ76436.1 | SCZ77507.1 | SAMN02910350_00253 | SAMN02910350_00827 | DNA repair exonuclease SbcCD nuclease subunit. | Topoisomerase DNA binding C4 zinc finger. | 0.932 |
SCZ76436.1 | SCZ77606.1 | SAMN02910350_00253 | SAMN02910350_00883 | DNA repair exonuclease SbcCD nuclease subunit. | Rad3-related DNA helicase. | 0.859 |
SCZ76436.1 | SCZ80628.1 | SAMN02910350_00253 | SAMN02910350_02392 | DNA repair exonuclease SbcCD nuclease subunit. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.630 |
SCZ76436.1 | SCZ81334.1 | SAMN02910350_00253 | SAMN02910350_02765 | DNA repair exonuclease SbcCD nuclease subunit. | DNA sulfur modification protein DndD. | 0.995 |
SCZ76436.1 | polA | SAMN02910350_00253 | SAMN02910350_02227 | DNA repair exonuclease SbcCD nuclease subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.990 |
SCZ76436.1 | recA | SAMN02910350_00253 | SAMN02910350_01721 | DNA repair exonuclease SbcCD nuclease subunit. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.843 |
SCZ76436.1 | topA | SAMN02910350_00253 | SAMN02910350_01299 | DNA repair exonuclease SbcCD nuclease subunit. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.723 |
SCZ77463.1 | SCZ76436.1 | SAMN02910350_00782 | SAMN02910350_00253 | DNA topoisomerase-3. | DNA repair exonuclease SbcCD nuclease subunit. | 0.752 |
SCZ77463.1 | SCZ77507.1 | SAMN02910350_00782 | SAMN02910350_00827 | DNA topoisomerase-3. | Topoisomerase DNA binding C4 zinc finger. | 0.987 |
SCZ77463.1 | SCZ77606.1 | SAMN02910350_00782 | SAMN02910350_00883 | DNA topoisomerase-3. | Rad3-related DNA helicase. | 0.771 |
SCZ77463.1 | SCZ80628.1 | SAMN02910350_00782 | SAMN02910350_02392 | DNA topoisomerase-3. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.665 |
SCZ77463.1 | SCZ81334.1 | SAMN02910350_00782 | SAMN02910350_02765 | DNA topoisomerase-3. | DNA sulfur modification protein DndD. | 0.898 |
SCZ77463.1 | SCZ81337.1 | SAMN02910350_00782 | SAMN02910350_02766 | DNA topoisomerase-3. | Exodeoxyribonuclease I subunit D. | 0.701 |
SCZ77463.1 | polA | SAMN02910350_00782 | SAMN02910350_02227 | DNA topoisomerase-3. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.864 |
SCZ77463.1 | recA | SAMN02910350_00782 | SAMN02910350_01721 | DNA topoisomerase-3. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.844 |
SCZ77507.1 | SCZ76436.1 | SAMN02910350_00827 | SAMN02910350_00253 | Topoisomerase DNA binding C4 zinc finger. | DNA repair exonuclease SbcCD nuclease subunit. | 0.932 |
SCZ77507.1 | SCZ77463.1 | SAMN02910350_00827 | SAMN02910350_00782 | Topoisomerase DNA binding C4 zinc finger. | DNA topoisomerase-3. | 0.987 |
SCZ77507.1 | SCZ77606.1 | SAMN02910350_00827 | SAMN02910350_00883 | Topoisomerase DNA binding C4 zinc finger. | Rad3-related DNA helicase. | 0.893 |
SCZ77507.1 | SCZ80628.1 | SAMN02910350_00827 | SAMN02910350_02392 | Topoisomerase DNA binding C4 zinc finger. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.849 |
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