STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ77521.1Response regulator receiver domain-containing protein. (227 aa)    
Predicted Functional Partners:
SCZ77525.1
Signal transduction histidine kinase.
 
  
 0.834
SCZ76185.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.788
SCZ77522.1
Hpt domain-containing protein.
  
   0.723
SCZ77524.1
HD domain-containing protein.
 
   0.623
SCZ77466.1
Signal transduction histidine kinase.
  
   0.577
SCZ79393.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.548
SCZ77460.1
Signal transduction histidine kinase.
 
    0.522
SCZ80414.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.515
SCZ77334.1
Two-component system, chemotaxis family, response regulator CheV.
 
 
 0.510
SCZ80327.1
Methyl-accepting chemotaxis protein.
 
 
 0.505
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.