STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ77533.1Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains. (273 aa)    
Predicted Functional Partners:
SCZ77531.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
     0.756
SCZ77535.1
Hypothetical protein.
       0.752
SCZ76364.1
Two component transcriptional regulator, LytTR family.
  
     0.739
SCZ77529.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
     0.723
SCZ78918.1
Two component transcriptional regulator, LytTR family.
  
     0.701
SCZ76919.1
Two-component system, sensor histidine kinase YesM.
  
     0.699
SCZ77537.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
     0.691
SCZ79556.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.640
SCZ76338.1
Two-component system, sensor histidine kinase YesM.
  
     0.636
SCZ81633.1
Two component transcriptional regulator, LytTR family.
  
     0.600
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.