Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ77071.1 | SCZ77568.1 | SAMN02910350_00589 | SAMN02910350_00864 | AraC-type DNA-binding protein. | DNA-binding transcriptional regulator, LysR family. | 0.496 |
SCZ77516.1 | SCZ77568.1 | SAMN02910350_00836 | SAMN02910350_00864 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family. | 0.641 |
SCZ77516.1 | SCZ77979.1 | SAMN02910350_00836 | SAMN02910350_01029 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family. | 0.763 |
SCZ77566.1 | SCZ77568.1 | SAMN02910350_00863 | SAMN02910350_00864 | 2,4-dienoyl-CoA reductase. | DNA-binding transcriptional regulator, LysR family. | 0.668 |
SCZ77566.1 | SCZ77570.1 | SAMN02910350_00863 | SAMN02910350_00865 | 2,4-dienoyl-CoA reductase. | Adenosine/AMP deaminase. | 0.463 |
SCZ77566.1 | SCZ77572.1 | SAMN02910350_00863 | SAMN02910350_00866 | 2,4-dienoyl-CoA reductase. | tRNA G18 (ribose-2'-O)-methylase SpoU. | 0.476 |
SCZ77566.1 | SCZ77576.1 | SAMN02910350_00863 | SAMN02910350_00868 | 2,4-dienoyl-CoA reductase. | Alpha galactosidase A. | 0.487 |
SCZ77568.1 | SCZ77071.1 | SAMN02910350_00864 | SAMN02910350_00589 | DNA-binding transcriptional regulator, LysR family. | AraC-type DNA-binding protein. | 0.496 |
SCZ77568.1 | SCZ77516.1 | SAMN02910350_00864 | SAMN02910350_00836 | DNA-binding transcriptional regulator, LysR family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.641 |
SCZ77568.1 | SCZ77566.1 | SAMN02910350_00864 | SAMN02910350_00863 | DNA-binding transcriptional regulator, LysR family. | 2,4-dienoyl-CoA reductase. | 0.668 |
SCZ77568.1 | SCZ77570.1 | SAMN02910350_00864 | SAMN02910350_00865 | DNA-binding transcriptional regulator, LysR family. | Adenosine/AMP deaminase. | 0.648 |
SCZ77568.1 | SCZ77572.1 | SAMN02910350_00864 | SAMN02910350_00866 | DNA-binding transcriptional regulator, LysR family. | tRNA G18 (ribose-2'-O)-methylase SpoU. | 0.615 |
SCZ77568.1 | SCZ77574.1 | SAMN02910350_00864 | SAMN02910350_00867 | DNA-binding transcriptional regulator, LysR family. | Hypothetical protein. | 0.606 |
SCZ77568.1 | SCZ77576.1 | SAMN02910350_00864 | SAMN02910350_00868 | DNA-binding transcriptional regulator, LysR family. | Alpha galactosidase A. | 0.606 |
SCZ77568.1 | SCZ77578.1 | SAMN02910350_00864 | SAMN02910350_00869 | DNA-binding transcriptional regulator, LysR family. | Hypothetical protein. | 0.479 |
SCZ77568.1 | SCZ77979.1 | SAMN02910350_00864 | SAMN02910350_01029 | DNA-binding transcriptional regulator, LysR family. | DNA-binding transcriptional regulator, LysR family. | 0.573 |
SCZ77568.1 | SCZ80923.1 | SAMN02910350_00864 | SAMN02910350_02545 | DNA-binding transcriptional regulator, LysR family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.508 |
SCZ77570.1 | SCZ77566.1 | SAMN02910350_00865 | SAMN02910350_00863 | Adenosine/AMP deaminase. | 2,4-dienoyl-CoA reductase. | 0.463 |
SCZ77570.1 | SCZ77568.1 | SAMN02910350_00865 | SAMN02910350_00864 | Adenosine/AMP deaminase. | DNA-binding transcriptional regulator, LysR family. | 0.648 |
SCZ77570.1 | SCZ77572.1 | SAMN02910350_00865 | SAMN02910350_00866 | Adenosine/AMP deaminase. | tRNA G18 (ribose-2'-O)-methylase SpoU. | 0.749 |
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