STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ77610.1EAL and modified HD-GYP domain-containing signal transduction protein. (407 aa)    
Predicted Functional Partners:
SCZ77334.1
Two-component system, chemotaxis family, response regulator CheV.
 
     0.630
SCZ80822.1
Hypothetical protein.
  
     0.608
SCZ79554.1
Hypothetical protein.
  
     0.560
SCZ78457.1
Flagellar biosynthetic protein FliR.
 
     0.453
SCZ78779.1
ABC-2 type transport system permease protein.
  
     0.449
SCZ75987.1
Hypothetical protein.
  
     0.435
SCZ78774.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
     0.427
SCZ78772.1
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
     0.424
SCZ76401.1
Lysophospholipase L1.
  
     0.408
SCZ79762.1
Haloacid dehalogenase-like hydrolase.
  
     0.405
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.