Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCZ76697.1 | SCZ77921.1 | SAMN02910350_00372 | SAMN02910350_01000 | Dihydroxyacetone kinase family protein. | EDD domain protein, DegV family. | 0.640 |
SCZ76697.1 | SCZ81439.1 | SAMN02910350_00372 | SAMN02910350_02817 | Dihydroxyacetone kinase family protein. | Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family. | 0.461 |
SCZ77912.1 | SCZ77915.1 | SAMN02910350_00995 | SAMN02910350_00997 | Nitroreductase. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.677 |
SCZ77912.1 | SCZ77917.1 | SAMN02910350_00995 | SAMN02910350_00998 | Nitroreductase. | Hypothetical protein. | 0.707 |
SCZ77912.1 | SCZ77919.1 | SAMN02910350_00995 | SAMN02910350_00999 | Nitroreductase. | Heptaprenyl diphosphate synthase. | 0.642 |
SCZ77912.1 | SCZ77921.1 | SAMN02910350_00995 | SAMN02910350_01000 | Nitroreductase. | EDD domain protein, DegV family. | 0.592 |
SCZ77912.1 | SCZ77923.1 | SAMN02910350_00995 | SAMN02910350_01001 | Nitroreductase. | Uncharacterized membrane protein HdeD, DUF308 family. | 0.441 |
SCZ77912.1 | SCZ77926.1 | SAMN02910350_00995 | SAMN02910350_01002 | Nitroreductase. | Hypothetical protein. | 0.441 |
SCZ77912.1 | SCZ77927.1 | SAMN02910350_00995 | SAMN02910350_01003 | Nitroreductase. | Transcriptional regulator, TetR family. | 0.439 |
SCZ77915.1 | SCZ77912.1 | SAMN02910350_00997 | SAMN02910350_00995 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Nitroreductase. | 0.677 |
SCZ77915.1 | SCZ77917.1 | SAMN02910350_00997 | SAMN02910350_00998 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.940 |
SCZ77915.1 | SCZ77919.1 | SAMN02910350_00997 | SAMN02910350_00999 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Heptaprenyl diphosphate synthase. | 0.955 |
SCZ77915.1 | SCZ77921.1 | SAMN02910350_00997 | SAMN02910350_01000 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | EDD domain protein, DegV family. | 0.577 |
SCZ77915.1 | SCZ77923.1 | SAMN02910350_00997 | SAMN02910350_01001 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Uncharacterized membrane protein HdeD, DUF308 family. | 0.510 |
SCZ77915.1 | SCZ77926.1 | SAMN02910350_00997 | SAMN02910350_01002 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.504 |
SCZ77915.1 | SCZ77927.1 | SAMN02910350_00997 | SAMN02910350_01003 | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Transcriptional regulator, TetR family. | 0.500 |
SCZ77917.1 | SCZ77912.1 | SAMN02910350_00998 | SAMN02910350_00995 | Hypothetical protein. | Nitroreductase. | 0.707 |
SCZ77917.1 | SCZ77915.1 | SAMN02910350_00998 | SAMN02910350_00997 | Hypothetical protein. | Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.940 |
SCZ77917.1 | SCZ77919.1 | SAMN02910350_00998 | SAMN02910350_00999 | Hypothetical protein. | Heptaprenyl diphosphate synthase. | 0.981 |
SCZ77917.1 | SCZ77921.1 | SAMN02910350_00998 | SAMN02910350_01000 | Hypothetical protein. | EDD domain protein, DegV family. | 0.591 |
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