STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ79146.1Protein of unknown function. (407 aa)    
Predicted Functional Partners:
SCZ77279.1
Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
  
     0.616
SCZ80567.1
Hypothetical protein.
  
     0.592
SCZ79148.1
Glycosyl hydrolases family 35; Belongs to the glycosyl hydrolase 35 family.
       0.538
SCZ76197.1
Septum formation initiator.
  
     0.536
SCZ77349.1
Hypothetical protein.
  
     0.532
SCZ77351.1
Hypothetical protein.
  
     0.514
SCZ79355.1
Adenosylcobinamide kinase.
  
     0.497
SCZ76438.1
Uncharacterized protein YhaN.
  
     0.483
SCZ78065.1
Cell division protein FtsQ.
  
     0.476
SCZ78853.1
Hypothetical protein.
 
    0.458
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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