STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ79777.1Hypothetical protein. (356 aa)    
Predicted Functional Partners:
SCZ76019.1
Type IV pilus assembly protein PilC.
  
  
 0.839
SCZ79776.1
ABC-2 type transport system ATP-binding protein.
 
    0.835
SCZ79780.1
Putative transcriptional regulator.
 
     0.712
SCZ78684.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.686
SCZ79778.1
Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.
       0.677
SCZ78723.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family.
  
     0.645
SCZ76401.1
Lysophospholipase L1.
  
     0.632
SCZ78682.1
Hypothetical protein.
  
     0.625
SCZ78035.1
Hypothetical protein.
  
     0.624
SCZ75987.1
Hypothetical protein.
  
    0.615
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.