STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (325 aa)    
Predicted Functional Partners:
SCZ80270.1
Biotin transport system substrate-specific component.
  
  
 0.711
SCZ80266.1
Peptidase family S41.
       0.482
SCZ79595.1
NADH-quinone oxidoreductase subunit F.
     
 0.470
thiC
Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
 
  
 0.447
SCZ80078.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF.
     
 0.432
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
     
 0.430
NifJ
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
       0.424
SCZ78808.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
  
 0.412
SCZ80257.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
  
 0.412
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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