STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ80796.1Glycosyltransferase involved in cell wall bisynthesis. (267 aa)    
Predicted Functional Partners:
SCZ80798.1
Glycosyltransferase involved in cell wall bisynthesis.
 
   0.875
SCZ80794.1
Hypothetical protein.
 
    0.811
SCZ80792.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.804
SCZ80790.1
ABC-2 type transport system permease protein.
 
  
 0.803
SCZ80788.1
ABC-2 type transport system permease protein.
 
    0.801
SCZ79709.1
Glycosyl transferase family 2.
  
     0.773
SCZ80179.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.773
SCZ80786.1
Glycosyltransferases involved in cell wall biogenesis.
    
0.761
SCZ80799.1
Transcriptional attenuator, LytR family.
       0.750
SCZ80166.1
Glycosyl transferase family 2.
 
    0.666
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.