STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ81010.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
SCZ81008.1
Hypothetical protein.
 
    
0.757
SCZ78701.1
Predicted membrane protein.
  
     0.753
SCZ79972.1
Foldase protein PrsA.
  
    0.748
SCZ78690.1
Hypothetical protein.
  
     0.715
SCZ78684.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.687
SCZ80985.1
Von Willebrand factor type A domain-containing protein.
  
  
 0.683
SCZ75987.1
Hypothetical protein.
  
     0.677
SCZ79916.1
RNA ligase, DRB0094 family.
  
     0.677
SCZ76401.1
Lysophospholipase L1.
  
     0.675
SCZ81645.1
Protein of unknown function.
  
     0.644
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.