STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCZ81304.1DnaJ domain-containing protein. (305 aa)    
Predicted Functional Partners:
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.978
HtpG
Molecular chaperone HtpG.
  
 0.951
SCZ80740.1
Tetratricopeptide repeat-containing protein.
   
 0.837
SCZ81303.1
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins; Belongs to the polypeptide deformylase family.
   
 
 0.811
SCZ75987.1
Hypothetical protein.
 
 
 0.790
SCZ80985.1
Von Willebrand factor type A domain-containing protein.
  
     0.765
grpE
Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]
  
 
 0.758
SCZ77003.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
  
     0.757
SCZ81301.1
Ala-tRNA(Pro) deacylase.
 
     0.756
SCZ76401.1
Lysophospholipase L1.
 
  
 0.742
Your Current Organism:
Pseudobutyrivibrio xylanivorans
NCBI taxonomy Id: 185007
Other names: ATCC BAA-455, DSM 14809, P. xylanivorans, Pseudobutyrivibrio xylanivorans Kopecny et al. 2003, Pseudobutyrivibrio xylanovorans, strain Mz 5
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