Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bhn_I1144 | bhn_I1145 | bhn_I1144 | bhn_I1145 | Na+/H+ antiporter. | Metallophosphoesterase. | 0.551 |
bhn_I1144 | bhn_I1912 | bhn_I1144 | bhn_I1912 | Na+/H+ antiporter. | PTS system frucose specific IIABC component. | 0.481 |
bhn_I1144 | scpA | bhn_I1144 | bhn_I1146 | Na+/H+ antiporter. | Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.551 |
bhn_I1144 | scpB | bhn_I1144 | bhn_I1147 | Na+/H+ antiporter. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.564 |
bhn_I1145 | bhn_I1144 | bhn_I1145 | bhn_I1144 | Metallophosphoesterase. | Na+/H+ antiporter. | 0.551 |
bhn_I1145 | scpA | bhn_I1145 | bhn_I1146 | Metallophosphoesterase. | Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.854 |
bhn_I1145 | scpB | bhn_I1145 | bhn_I1147 | Metallophosphoesterase. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.853 |
bhn_I1364 | cmk | bhn_I1364 | bhn_I1839 | Pseudouridine synthase. | Cytidylate kinase. | 0.745 |
bhn_I1364 | der | bhn_I1364 | bhn_I1281 | Pseudouridine synthase. | Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.828 |
bhn_I1364 | scpB | bhn_I1364 | bhn_I1147 | Pseudouridine synthase. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.630 |
bhn_I1389 | cmk | bhn_I1389 | bhn_I1839 | Pseudouridine synthase. | Cytidylate kinase. | 0.831 |
bhn_I1389 | der | bhn_I1389 | bhn_I1281 | Pseudouridine synthase. | Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.790 |
bhn_I1389 | scpA | bhn_I1389 | bhn_I1146 | Pseudouridine synthase. | Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.481 |
bhn_I1389 | scpB | bhn_I1389 | bhn_I1147 | Pseudouridine synthase. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.703 |
bhn_I1912 | bhn_I1144 | bhn_I1912 | bhn_I1144 | PTS system frucose specific IIABC component. | Na+/H+ antiporter. | 0.481 |
bhn_I1912 | scpB | bhn_I1912 | bhn_I1147 | PTS system frucose specific IIABC component. | Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.619 |
cmk | bhn_I1364 | bhn_I1839 | bhn_I1364 | Cytidylate kinase. | Pseudouridine synthase. | 0.745 |
cmk | bhn_I1389 | bhn_I1839 | bhn_I1389 | Cytidylate kinase. | Pseudouridine synthase. | 0.831 |
cmk | der | bhn_I1839 | bhn_I1281 | Cytidylate kinase. | Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.979 |
cmk | scpA | bhn_I1839 | bhn_I1146 | Cytidylate kinase. | Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.732 |
page 1 of 3