STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhn_I1473Spermidine/putrescine ABC transporter permease protein. (257 aa)    
Predicted Functional Partners:
bhn_I1474
Spermidine/putrescine ABC transporter permease protein.
  
  0.998
bhn_I1472
Spermidine/putrescine ABC transporter ATP-binding protein.
 
  
 0.986
bhn_I1475
Spermidine/putrescine ABC transporter substrate-binding protein.
 
  
  0.984
bhn_I2577
Sugar ABC transporter ATP-binding protein.
 
 
 0.850
bhn_I2623
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.807
bhn_I1819
Sugar ABC transporter permease protein.
  
 
 0.803
bhn_I0649
Sugar ABC transporter substrate-binding protein.
  
 
 0.589
bhn_I1652
Sugar ABC transporter substrate-binding protein.
  
 
 0.589
bhn_I1821
Sugar ABC transporter substrate-binding protein.
  
 
 0.589
AOZ94997.1
Sugar ABC transporter substrate-binding protein.
  
 
 0.589
Your Current Organism:
Butyrivibrio hungatei
NCBI taxonomy Id: 185008
Other names: ATCC BAA-456, B. hungatei, Butyrivibrio hungatei Kopecny et al. 2003, DSM 14810, strain JK 615
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.