STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhn_I2246Amino acid carrier protein AgcS. (472 aa)    
Predicted Functional Partners:
bhn_I1302
Transporter solute:sodium symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.589
bhn_I1798
Na+-dependent transporter SNF family.
 
  
 0.575
bhn_I2347
Voltage gated chloride channel protein.
  
    0.559
bhn_I2247
SAM-dependent methyltransferase.
       0.519
bhn_I0279
Sodium:dicarboxylate symporter.
 
  
 0.497
bhn_I1144
Na+/H+ antiporter.
 
  
 0.479
bhn_I0137
Ammonium transporter Amt; Belongs to the P(II) protein family.
     
 0.469
bhn_I2245
GNAT family acetyltransferase.
       0.466
bhn_I1635
2-methylcitrate synthase/citrate synthase II.
   
  
 0.450
bhn_I2248
Hypothetical protein.
       0.433
Your Current Organism:
Butyrivibrio hungatei
NCBI taxonomy Id: 185008
Other names: ATCC BAA-456, B. hungatei, Butyrivibrio hungatei Kopecny et al. 2003, DSM 14810, strain JK 615
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