STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001704765_01881Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_001704765_01884
Unannotated protein.
  
 0.969
GCA_001704765_03901
Unannotated protein.
   
 0.927
GCA_001704765_01882
Unannotated protein.
  
 0.915
GCA_001704765_05775
Unannotated protein.
  
 0.884
GCA_001704765_01885
Unannotated protein.
  
 0.849
GCA_001704765_03996
Unannotated protein.
  
 0.846
GCA_001704765_02213
Unannotated protein.
  
 0.841
GCA_001704765_01856
Unannotated protein.
  
 0.797
GCA_001704765_03692
Unannotated protein.
   
 0.794
GCA_001704765_02940
Unannotated protein.
  
 0.791
Your Current Organism:
Ensifer shofinae
NCBI taxonomy Id: 1850094
Other names: ACCC 19939, CCBAU 251167, E. shofinae, Ensifer shofinae Chen et al. 2017, Ensifer sp. CCBAU 251167, HAMBI 3507, LMG 29645, LMG:29645, Sinorhizobium sp. CCBAU 25426
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.